Carnitine–acylcarnitine translocase deficiency (CACT deficiency) is a rare, severe inherited metabolic disorder of fatty acid oxidation (the process of breaking down stored fats in the body to be used as energy). It impairs the production of a protein that transports long-chain fatty acids into the mitochondria, called the carnitine shuttle. As a result, affected individuals—especially newborns and infants—are unable to generate adequate energy, particularly during periods of fasting, illness, or metabolic stress. CACT deficiency is considered one of the most severe disorders of mitochondrial fatty acid transport and often presents early in life with life-threatening symptoms, including breathing problems, seizures, and irregular heartbeat (arrhythmia). As a result, most infants born with CACT do not live past infancy, and those with less severe cases are still at high risk for liver failure, damage to the nervous system, coma, and death.
Carnitine–acylcarnitine translocase deficiency (CACT deficiency) is a rare, severe inherited metabolic disorder of fatty acid oxidation (the process of breaking down stored fats in the body to be used as energy). It impairs the production of a protein that transports long-chain fatty acids into the mitochondria, called the carnitine shuttle. As a result, affected individuals—especially newborns and infants—are unable to generate adequate energy, particularly during periods of fasting, illness, or metabolic stress. CACT deficiency is considered one of the most severe disorders of mitochondrial fatty acid transport and often presents early in life with life-threatening symptoms, including breathing problems, seizures, and irregular heartbeat (arrhythmia). As a result, most infants born with CACT do not live past infancy, and those with less severe cases are still at high risk for liver failure, damage to the nervous system, coma, and death.
CACT deficiency is extremely rare, with an estimated prevalence of less than 1 in 1,000,000 live births worldwide. Higher frequencies have been reported in certain populations due to random mutations, including individuals of East Asian (Hong Kong and Taiwan specifically), Middle Eastern, or Mediterranean descent. Because of its severity, many cases are identified through newborn screening or early metabolic crises.
| Name | Abbreviation |
|---|---|
| SLC25A20 deficiency | |
| CACT deficiency | |
| Carnitine–acylcarnitine carrier deficiency | |
| Mitochondrial carnitine–acylcarnitine translocase deficiency |
CACT deficiency is caused by mutations in the SLC25A20 gene, which encodes the carnitine–acylcarnitine translocase (CACT) protein located in the inner mitochondrial membrane. This protein is essential for transporting long-chain fatty-acids stored in the cell’s cytoplasm into the mitochondrial matrix for β-oxidation, the process of breaking them down into energy. Mutations lead to a lack of this ‘carnitine shuttle’ and failure to transport fatty acids, resulting in energy deficiency, accumulation of toxic fatty acid intermediates, and impaired ketone production. This is especially damaging to cells in organs that require a lot of energy, such as the heart, liver, and muscles.
The disorder is inherited in an autosomal recessive pattern (see RareShare Guide to Genetic Inheritance), or by a random mutation in offspring. CACT cannot be caused by environmental factors, though events such as long-term fasting can trigger symptoms in individuals with these disease mutations.
Symptoms typically present in the neonatal period or early infancy, often triggered by fasting or illness, and may include:
Hypoketotic hypoglycemia (low blood sugar without ketone production) - In the absence of glucose (fasting), the body breaks down long-chain fatty acids to form ketones. However, individuals with CACT cannot break down fatty acids effectively, and thus have lower ketone production
Cardiomyopathy and cardiac arrhythmias
Liver dysfunction, including hepatomegaly and elevated liver enzymes
Severe muscle weakness or hypotonia - due to the body’s lack of energy to function
Respiratory distress
Lethargy, seizures, or coma - due to the build-up of ammonia in the blood (see below)
Hyperammonemia and metabolic acidosis - Without the ability to convert fatty acids to energy, the body begins to break down proteins in the muscle. This leads to an ammonium byproduct, which builds up in the blood and can become toxic to organs and the brain
In rare milder or later-onset cases, symptoms may include episodic muscle weakness, rhabdomyolysis, or exercise intolerance, though these forms are uncommon.
CACT deficiency is suspected based on clinical presentation, abnormal newborn screening results, and biochemical findings consistent with a long-chain fatty acid oxidation disorder. Characteristic elevation of long-chain acylcarnitines (special fatty-acids) C16, C18, and C18:1 can lead to further investigation. Definitive diagnosis requires genetic confirmation of mutations to the SLC25A20 gene. Early diagnosis is critical, as prompt treatment can be lifesaving.
Newborn screening: Elevated long-chain acylcarnitines (e.g., C16, C18:1) with low free carnitine
Plasma acylcarnitine profile: Characteristic accumulation of long-chain acylcarnitines
Urine organic acids: May show secondary abnormalities related to metabolic stress
Genetic testing: Identification of biallelic pathogenic variants in the SLC25A20 gene
Cardiac evaluation: Echocardiography and ECG to assess cardiomyopathy or arrhythmias
Laboratory studies during crises: Hypoglycemia (low blood sugar), metabolic acidosis (low ketones), elevated ammonia (due to breakdown of protein in muscles), and liver dysfunction
There is no cure for CACT deficiency, and management focuses on preventing metabolic decompensation:
Strict avoidance of fasting, with frequent feeding
Low–long-chain-fat diet and restriction of long-chain fatty acids
Supplementation with medium-chain triglycerides (MCTs), which bypass the defective transport system
Emergency protocols during illness, including intravenous glucose to prevent catabolism
Carnitine supplementation is controversial and used cautiously under specialist guidance
Cardiac and metabolic monitoring by a multidisciplinary metabolic care team
Early and aggressive management is essential to reduce the risk of metabolic crises
The prognosis of CACT deficiency is generally poor, particularly for the classic neonatal-onset form, which is often associated with high mortality in infancy despite treatment. Survivors may experience recurrent metabolic crises, cardiomyopathy, and developmental impairment. Even in less severe forms of the disease, individuals with CACT are at lifelong risk of complications such as heart-failure, seizure, coma, and death. Rare milder or later-onset forms have a more favorable prognosis but still require lifelong dietary management and careful monitoring. Early detection through newborn screening and strict adherence to treatment protocols can improve survival and outcomes, though the disorder remains one of the most severe fatty acid oxidation defects.
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