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RareShare Guide on Chromosomal Nomenclature

Publication date: 4 Jun 2025

What Are Chromosomes?

Chromosomes are thread-like structures found in the nucleus of every cell. They carry our genetic information (DNA). Humans typically have 46 chromosomes, arranged in 23 pairs.

How Are Chromosomes Labeled?

  • A short arm called the p arm (from the French “petit,” meaning small)
  • A long arm called the q arm (because it follows “p” in the alphabet)
  • A centromere, which is the “pinched” part that separates the p and q arms
  • Regions on each arm are numbered outward from the centromere (the center).
  • Bands and sub-bands are subdivisions seen under a microscope when chromosomes are stained.
  • The more numbers, the more specific the location.

Example: 3p22.1

  • 3: Chromosome number
  • p: Short arm of the chromosome
  • 2: The specific region
  • 2: Band within specific region
  • .1: Sub-band within the larger band

 

Example

What It Means

1p36

Chromosome 1, short arm, band 36

7q11.23

Chromosome 7, long arm, band 11, sub-band 23

del(15)(q11.2q13)

Deletion on chromosome 15, long arm, bands 11.2 to 13

dup(17)(p12)

Duplication on chromosome 17, short arm, band 12

 

Sources:

Geer, R. C., & Messersmith, D. J. (2002). Cytogenetic Banding Nomenclature [Image]. National Institutes of Health. https://en.wikipedia.org/wiki/File:Cytogenetic_Banding_Nomenclature.png

MedlinePlus. (2021, March 26). How do geneticists indicate the location of a gene? U.S. National Library of Medicine. https://medlineplus.gov/genetics/understanding/howgeneswork/genelocation/

Mrasek, K., Schoder, C., Teichmann, A. C., Behr, K., Franze, B., Wilhelm, K., ... & Liehr, T. (2009). The hierarchically organized splitting of chromosomal bands for all human chromosomes. Molecular Cytogenetics, 2(5). https://pmc.ncbi.nlm.nih.gov/articles/PMC2636822/

ScienceDirect. (n.d.). Chromosome Band - an overview. https://www.sciencedirect.com/topics/neuroscience/chromosome-band

Nature Education. (n.d.). Chromosome Mapping: Idiograms. https://www.nature.com/scitable/topicpage/chromosome-mapping-idiograms-302

NCBI Bookshelf. (n.d.). Chromosome Map - Genes and Disease. https://www.ncbi.nlm.nih.gov/books/NBK22266/

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